Index _ | A | C | E | F | G | H | L | M | P | R | S | T | V | W _ __init__() (vampire.model.Vampire method) _check_char() (in module vampire.quickstart) _parse_filter_info() (in module vampire.quickstart) _pca_eig() (in module vampire.amath) _pca_svd() (in module vampire.amath) A align_contour() (in module vampire.processing) align_contours() (in module vampire.processing) assign_clusters_id() (in module vampire.analysis) C check_property_csv_existence() (in module vampire.extraction) cluster_contours() (in module vampire.analysis) color_img() (in module vampire.coloring) E extract_contour_from_object() (in module vampire.extraction) extract_properties() (in module vampire.extraction) extract_properties_from_img() (in module vampire.extraction) extract_properties_from_img_set() (in module vampire.extraction) F fit() (vampire.model.Vampire method) fit_model() (in module vampire.quickstart) fit_models() (in module vampire.quickstart) fit_transform() (vampire.model.Vampire method) G generate_file_paths() (in module vampire.util) get_apply_properties_csv_path() (in module vampire.util) get_apply_properties_pickle_path() (in module vampire.util) get_cluster_order() (in module vampire.analysis) get_cum_explained_variance_ratio() (in module vampire.analysis) get_distribution() (in module vampire.analysis) get_explained_variance_ratio() (in module vampire.analysis) get_filtered_filenames() (in module vampire.extraction) get_img_set() (in module vampire.extraction) get_labeled_contours_df() (in module vampire.analysis) get_mean_aligned_contour() (in module vampire.processing) get_mean_cluster_contours() (in module vampire.analysis) get_mean_registered_contour() (in module vampire.processing) get_model_pickle_path() (in module vampire.util) get_optimal_n_pcs() (in module vampire.analysis) get_properties_csv_path() (in module vampire.util) get_properties_pickle_path() (in module vampire.util) get_rotation_matrix() (in module vampire.amath) get_shannon_entropy() (in module vampire.analysis) H hierarchical_cluster_contour() (in module vampire.analysis) L label_img() (in module vampire.coloring) label_imgs() (in module vampire.coloring) M mean_center() (in module vampire.amath) P pca() (in module vampire.amath) pca_transform_contours() (in module vampire.analysis) plot_contour_dendrogram() (in module vampire.plot) plot_contours() (in module vampire.plot) plot_dendrogram() (in module vampire.plot) plot_distribution() (in module vampire.plot) plot_distribution_contour() (in module vampire.plot) plot_distribution_contour_dendrogram() (in module vampire.plot) plot_representatives() (in module vampire.plot) R read_pickle() (in module vampire.util) read_properties() (in module vampire.extraction) register_contour() (in module vampire.processing) register_contours() (in module vampire.processing) reorder_centroids() (in module vampire.analysis) reorder_clusters() (in module vampire.analysis) S sample_contour() (in module vampire.processing) sample_contours() (in module vampire.processing) save_fig() (in module vampire.plot) set_plot_style() (in module vampire.plot) T transform() (vampire.model.Vampire method) transform_dataset() (in module vampire.quickstart) transform_datasets() (in module vampire.quickstart) V Vampire (class in vampire.model) W write_pickle() (in module vampire.util) write_properties() (in module vampire.extraction)