Index

_

_apply_models_parse_df() (in module vampire.model) _apply_models_parse_required_info() (in module vampire.model) _build_models_parse_df() (in module vampire.model) _build_models_parse_required_info() (in module vampire.model) _check_prohibited_char() (in module vampire.model)

_get_df_info() (in module vampire.plot) _is_filtered_img() (in module vampire.extraction) _parse_filter_info() (in module vampire.model) _pca_eig() (in module vampire.amath) _pca_svd() (in module vampire.amath)

A

align_contour() (in module vampire.processing) align_contours() (in module vampire.processing)

apply_model() (in module vampire.model) apply_models() (in module vampire.model) assign_clusters_id() (in module vampire.analysis)

B

build_model() (in module vampire.model)

build_models() (in module vampire.model)

C

cluster_contours() (in module vampire.analysis)

E

extract_contours() (in module vampire.extraction)

G

generate_file_paths() (in module vampire.util) get_contour_from_object() (in module vampire.extraction) get_contours_from_image() (in module vampire.extraction)

get_info_from_folder() (in module vampire.extraction) get_properties_from_image() (in module vampire.extraction) get_rotation_matrix() (in module vampire.amath)

I

initialize_model() (in module vampire.model)

M

mean_center() (in module vampire.amath)

P

pca() (in module vampire.amath) pca_contours() (in module vampire.analysis) pca_transform_contours() (in module vampire.analysis) plot_contour_dendrogram() (in module vampire.plot) plot_contours() (in module vampire.plot)

plot_dendrogram() (in module vampire.plot) plot_distribution() (in module vampire.plot) plot_distribution_contour() (in module vampire.plot) plot_distribution_contour_dendrogram() (in module vampire.plot) plot_representatives() (in module vampire.plot)

R

read_contours() (in module vampire.extraction) read_pickle() (in module vampire.util)

register_contour() (in module vampire.processing) register_contours() (in module vampire.processing)

S

sample_contour() (in module vampire.processing) sample_contours() (in module vampire.processing)

save_fig() (in module vampire.plot) set_plot_style() (in module vampire.plot)

W

write_clusters_info() (in module vampire.util)

write_contours() (in module vampire.extraction) write_pickle() (in module vampire.util)