Plot

plot_distribution_contour_dendrogram(…[, …])	Plots the distribution of mean contours in a bar graph with labeling of mean contours and their dendrogram.
plot_distribution_contour(contours_df[, …])	Plots the distribution of mean contours in a bar graph with labeling of mean contours.
plot_contour_dendrogram(contours_df[, …])	Plots dendrogram with mean contours.
plot_distribution(contours_df, object_index)	Plots the distribution of mean contours in a bar graph.
plot_dendrogram(contours_df[, output_path, …])	Plots dendrogram of mean contours.
plot_contours(contours_df, object_index[, …])	Plots mean contours.
plot_representatives(contours_df, object_index)	Plots representative object contours.
set_plot_style()	Set matplotlib plot settings of rcParams for better visualization.
save_fig(fig, output_path, fig_type[, …])	Save figure to local directory.

Implementation Details

_get_df_info(contours_df)

Returns mean of DataFrame columns by cluster id and number of clusters, coordinates, and points.

vampire.analysis.assign_clusters_id vampire.plot.plot_distribution_contour_dendrogram